5IYN

Protruding domain of GII.4 human norovirus CHDC2094


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Four decades of structural evolution of GII.4 norovirus

Singh, B.K.Hansman, G.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VP1
A, B
306Norovirus Hu/GII.4/CHDC2094/1974/USMutation(s): 0 
Find proteins for D0QJ68 (Norovirus Hu/GII.4/CHDC2094/1974/US)
Go to UniProtKB:  D0QJ68
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.152 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 89.190α = 90.00
b = 105.920β = 90.00
c = 135.860γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-04-05
    Type: Initial release