5IOL

Crystal structure of Nucleoside Diphosphate Kinase from Schistosoma mansoni


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.741 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.163 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of Nucleoside Diphosphate Kinase from Schistosoma mansoni

Torini, J.R.S.Romanello, L.Bird, L.E.Nettleship, J.E.Owens, R.J.Aller, P.DeMarco, R.Brandao-Neto, J.Pereira, H.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nucleoside diphosphate kinase
A, B, C, D, E, F, G, H, I, J, K, L
150Schistosoma mansoniMutation(s): 0 
EC: 2.7.4.6
Find proteins for G4VJY9 (Schistosoma mansoni)
Go to UniProtKB:  G4VJY9
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.741 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.163 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 211.760α = 90.00
b = 82.270β = 104.89
c = 122.370γ = 90.00
Software Package:
Software NamePurpose
xia2data scaling
PHENIXrefinement
PHASERphasing
PDB_EXTRACTdata extraction
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Sao Paulo Research FoundationBrazil2012/14223-9
Brazilian National Council for Scientific and Technological DevelopmentBrazil474402/2013-4

Revision History 

  • Version 1.0: 2017-03-08
    Type: Initial release
  • Version 1.1: 2019-04-17
    Type: Author supporting evidence, Data collection