5IBX

1.65 Angstrom Crystal Structure of Triosephosphate Isomerase (TIM) from Streptococcus pneumoniae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

1.65 Angstrom Crystal Structure of Triosephosphate Isomerase (TIM) from Streptococcus pneumoniae

Minasov, G.Shuvalova, L.Dubrovska, I.Flores, K.Shatsman, S.Kwon, K.Anderson, W.F.Center for Structural Genomics of Infectious Diseases

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Triosephosphate isomerase
A, B, D, E, H
255Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Mutation(s): 0 
Gene Names: tpiA
EC: 5.3.1.1
Find proteins for Q04JH4 (Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466))
Go to UniProtKB:  Q04JH4
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Triosephosphate isomerase
C, F, G
255Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Mutation(s): 0 
Gene Names: tpiA
EC: 5.3.1.1
Find proteins for Q04JH4 (Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466))
Go to UniProtKB:  Q04JH4
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CME
Query on CME
A, B, D, E, H
L-PEPTIDE LINKINGC5 H11 N O3 S2CYS
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 78.845α = 75.43
b = 84.351β = 65.97
c = 92.463γ = 62.03
Software Package:
Software NamePurpose
HKL-3000data scaling
HKL-3000data reduction
REFMACrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-03-09
    Type: Initial release