5I45

1.35 Angstrom Crystal Structure of C-terminal Domain of Glycosyl Transferase Group 1 Family Protein (LpcC) from Francisella tularensis.

• PDB DOI: https://doi.org/10.2210/pdb5I45/pdb

• Classification: TRANSFERASE
• Organism(s): Francisella tularensis subsp. tularensis SCHU S4
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2016-02-11 Released: 2016-02-24 
• Deposition Author(s): Minasov, G., Filippova, E., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Shatsman, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.35 Å
• R-Value Free: 0.203 
• R-Value Work: 0.162 
• R-Value Observed: 0.164 

Literature

1.35 Angstrom Crystal Structure of C-terminal Domain of Glycosyl Transferase Group 1 Family Protein (LpcC) from Francisella tularensis.

Minasov, G., Filippova, E., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Shatsman, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 24.62 kDa 
• Atom Count: 2,116 
• Modelled Residue Count: 195 
• Deposited Residue Count: 218 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glycosyl transferases group 1 family protein	A	218	Francisella tularensis subsp. tularensis SCHU S4	Mutation(s): 0  Gene Names: lpcC, FTT_1235c, BZ14_1572 EC: 2
UniProt
Find proteins for Q5NFJ9 (Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)) Explore Q5NFJ9  Go to UniProtKB:  Q5NFJ9

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.35 Å
• R-Value Free: 0.203 
• R-Value Work: 0.162 
• R-Value Observed: 0.164 
• Space Group: P 1 2₁ 1
• Diffraction Data: https://doi.org/10.18430/m35i45

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 38.484	α = 90
b = 58.962	β = 117.65
c = 41.646	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling
MoRDa	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2016-02-24 
Deposition Author(s): Minasov, G., Filippova, E., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Shatsman, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2016-02-24
  Type: Initial release
  
• Version 1.1: 2023-09-27
  Changes: Data collection, Database references, Derived calculations, Refinement description
• Version 1.2: 2023-11-15
  Changes: Data collection