5HYB

Crystal structure of myristoylated Y81A mutant MMTV matrix protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.216 

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of myristoylated Y81A mutant MMTV matrix protein

Brynda, J.Dostal, J.Zabransky, A.Dolezal, M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Matrix ProteinA, B91Mouse mammary tumor virus (STRAIN BR6)Mutation(s): 1 
Gene Names: gag
UniProt
Find proteins for P10258 (Mouse mammary tumor virus (strain BR6))
Explore P10258 
Go to UniProtKB:  P10258
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MYR (Subject of Investigation/LOI)
Query on MYR

Download Ideal Coordinates CCD File 
C [auth A], E [auth B]MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
 Ligand Interaction
PEG
Query on PEG

Download Ideal Coordinates CCD File 
D [auth A], F [auth B]DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.216 
  • Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 61.802α = 90
b = 61.802β = 90
c = 89.622γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
XDSdata scaling
REFMACphasing

Structure Validation

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Ligand Structure Quality Assessment  



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Czech Science Foundation (GA CR)Czech Republic15-05677S
NPUCzech RepublicLO1302
NPUCzech RepublicLO1304
RVOCzech RepublicRVO 61388963
RVOCzech RepublicRVO 68378050
RVOCzech RepublicRVO: 68378050

Revision History  (Full details and data files)

  • Version 1.0: 2017-06-28
    Type: Initial release