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Download EndnoteCrystal structure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus
Lansky, S., Shwartstien, S., Salama, R., Shoham, Y., Shoham, G.To be published.
5HO0
Crystal structure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus
- DOI: 10.2210/pdb5HO0/pdb
- Classification: HYDROLASE
- Organism(s): Geobacillus stearothermophilus
- Expression System: Escherichia coli
- Deposited: 2016-01-19 Released: 2017-02-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.255
- R-Value Work: 0.178
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Extracellular arabinanase | A | 848 | Geobacillus stearothermophilus | Mutation(s): 0 Gene Names: abnA |
Find proteins for B3EYN2 (Geobacillus stearothermophilus) Go to UniProtKB: B3EYN2 | ||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EPE Query on EPE | A | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HEPES C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N |  | Ligand Interaction | |
| CA Query on CA | A | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
| EDO Query on EDO | A | 1,2-ETHANEDIOL ETHYLENE GLYCOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| TRS Query on TRS | A | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRIS BUFFER C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.255
- R-Value Work: 0.178
- Space Group: P 21 21 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 73.715 | α = 90.00 |
| b = 82.614 | β = 90.00 |
| c = 131.704 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
Entry History
Deposition Data
- Deposited Date: 2016-01-19
- Released Date: 2017-02-01
- Deposition Author(s): Lansky, S., Shwartstien, S., Salama, R., Shoham, Y., Shoham, G.
