5H3U

Sm RNA bound to GEMIN5-WD


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.499 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.202 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural basis for specific recognition of pre-snRNA by Gemin5

Tang, X.Bharath, S.R.Piao, S.Tan, V.Q.Bowler, M.W.Song, H.

(2016) Cell Res. 26: 1353-1356


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Gem-associated protein 5
A, B
740Homo sapiensGene Names: GEMIN5
Find proteins for Q8TEQ6 (Homo sapiens)
Go to Gene View: GEMIN5
Go to UniProtKB:  Q8TEQ6
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (5'-R(*AP*AP*UP*UP*UP*UP*UP*GP*AP*C)-3')C10Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.499 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.202 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 76.836α = 90.00
b = 92.083β = 99.99
c = 110.801γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
XDSdata reduction
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-12-28
    Type: Initial release
  • Version 1.1: 2017-09-27
    Type: Data collection