5GWV

Structure of MoeN5-Sso7d fusion protein in complex with a substrate analogue


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism

Ko, T.-P.Zhang, L.Chen, C.-C.Oldfield, E.Guo, R.-T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
MoeN5,DNA-binding protein 7d
A, B, C, D
343Streptomyces viridosporusSaccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
This entity is chimeric
Mutation(s): 0 
Gene Names: moeN5, sso7d (sso7d-1)
Find proteins for A0A010 (Streptomyces viridosporus)
Go to UniProtKB:  A0A010
Find proteins for P39476 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2))
Go to UniProtKB:  P39476
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
78S
Query on 78S

Download SDF File 
Download CCD File 
D
(2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid
C20 H35 O7 P
SUINKCORNPNGEZ-MQDURZRJSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.174 
  • Space Group: C 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 137.940α = 90.00
b = 217.697β = 90.00
c = 104.549γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling
CNSphasing
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and TechnologyTaiwanMOST105-0210-01-12-01

Revision History 

  • Version 1.0: 2017-09-20
    Type: Initial release