5GV2

Crystal structure of Arginine-bound CASTOR1 from Homo sapiens


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural mechanism for the arginine sensing and regulation of CASTOR1 in the mTORC1 signaling pathway

Gai, Z.Wang, Q.Yang, C.Wang, L.Deng, W.Wu, G.

(2016) Cell Discov 2: 16051-16051


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GATS-like protein 3
C, A
349Homo sapiensMutation(s): 0 
Gene Names: CASTOR1 (GATSL3)
Find proteins for Q8WTX7 (Homo sapiens)
Go to Gene View: CASTOR1
Go to UniProtKB:  Q8WTX7
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
C
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
ARG
Query on ARG

Download SDF File 
Download CCD File 
A
ARGININE
C6 H15 N4 O2
ODKSFYDXXFIFQN-BYPYZUCNSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.190 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 47.547α = 90.00
b = 76.834β = 96.21
c = 95.223γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2016-09-01 
  • Released Date: 2017-09-06 
  • Deposition Author(s): Gai, Z.C., Wu, G.

Revision History 

  • Version 1.0: 2017-09-06
    Type: Initial release
  • Version 1.1: 2018-05-23
    Type: Data collection
  • Version 1.2: 2019-03-20
    Type: Data collection, Database references