3D Crystal Structure of LsrB Bound to Furanosyl diester (R)-THMF, from Salmonella typhi
Gopinath, S., Perumal, P., Rahul, R., Arockiasamy, A., Sundarabaalaji, N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Autoinducer 2-binding protein LsrB | 340 | Salmonella enterica subsp. enterica serovar Typhi | Mutation(s): 0  Gene Names: lsrB, STY3793, t3541 | ||
UniProt | |||||
Find proteins for Q8Z2X8 (Salmonella typhi) Explore Q8Z2X8  Go to UniProtKB:  Q8Z2X8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8Z2X8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PAV Query on PAV | B [auth A] | (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran C5 H10 O5 BVIYGXUQVXBHQS-IUYQGCFVSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 41.582 | α = 90 |
b = 61.754 | β = 90 |
c = 115.753 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data processing |
HKL-2000 | data scaling |
PHENIX | phasing |
PHENIX | model building |
Funding Organization | Location | Grant Number |
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Indian Council of Medical Research | India | 2011-15260 |