5FWV
Wnt modulator Kremen crystal form III at 3.2A
- PDB DOI: https://doi.org/10.2210/pdb5FWV/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Homo sapiens
- Mutation(s): No 
- Deposited: 2016-02-21 Released: 2016-07-20 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.20 Å
- R-Value Free: 0.265 
- R-Value Work: 0.195 
- R-Value Observed: 0.199 
This is version 1.4 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
KREMEN PROTEIN 1 | 406 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q96MU8 (Homo sapiens) Explore Q96MU8  Go to UniProtKB:  Q96MU8 | |||||
PHAROS:  Q96MU8 GTEx:  ENSG00000183762  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q96MU8 | ||||
Sequence AnnotationsExpand | |||||
|
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | F [auth A], G [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
CL Query on CL | B [auth A], C [auth A], D [auth A], E [auth A], H [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.20 Å
- R-Value Free: 0.265 
- R-Value Work: 0.195 
- R-Value Observed: 0.199 
- Space Group: P 41 21 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.844 | α = 90 |
b = 67.844 | β = 90 |
c = 198.193 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
Entry History 
Deposition Data
- Released Date: 2016-07-20  Deposition Author(s): Zebisch, M., Jackson, V.A., Jones, E.Y.
Revision History (Full details and data files)
- Version 1.0: 2016-07-20
Type: Initial release - Version 1.1: 2016-07-27
Changes: Other, Structure summary - Version 1.2: 2016-08-24
Changes: Database references - Version 1.3: 2016-09-28
Changes: Database references - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Other, Structure summary