5FJO

N-acyl amino acid racemase from Amycolatopsis sp. Ts-1-60: G291D- F323Y mutant in complex with N-acetyl naphthylalanine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.145 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of N-Acylamino Acid Racemase Mutants in Complex with Substrates

Sanchez-Carron, G.Campopiano, D.Grogan, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
N/A
A, B
368Amycolatopsis spMutation(s): 2 
Gene Names: Aaar (menC)
EC: 4.2.1.113
Find proteins for Q44244 (Amycolatopsis sp)
Go to UniProtKB:  Q44244
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
NPQ
Query on NPQ

Download SDF File 
Download CCD File 
A, B
N-acetyl naphthylalanine
C15 H15 N O3
HGTIILKZSFKZMS-AWEZNQCLSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.145 
  • Space Group: I 4 2 2
Unit Cell:
Length (Å)Angle (°)
a = 164.710α = 90.00
b = 164.710β = 90.00
c = 169.590γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
XDSdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-11-16
    Type: Initial release