5FDN

Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate

Connell, M.B.Lee, M.J.Y.Plaxton, W.C.Jia, Z.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphoenolpyruvate carboxylase 3
A, B
987Arabidopsis thalianaMutation(s): 0 
Gene Names: PPC3 (PEPC, PPC)
EC: 4.1.1.31
Find proteins for Q84VW9 (Arabidopsis thaliana)
Go to UniProtKB:  Q84VW9
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FLC
Query on FLC

Download SDF File 
Download CCD File 
A, B
CITRATE ANION
C6 H5 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-K
 Ligand Interaction
ASP
Query on ASP

Download SDF File 
Download CCD File 
A, B
ASPARTIC ACID
C4 H7 N O4
CKLJMWTZIZZHCS-REOHCLBHSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.173 
  • Space Group: C 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 264.260α = 90.00
b = 268.130β = 90.00
c = 77.930γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
Blu-Icedata collection
XDSdata scaling
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Natural Sciences and Engineering Research Council (Canada)CanadaRGPIN203705-2013

Revision History 

  • Version 1.0: 2017-02-08
    Type: Initial release
  • Version 1.1: 2017-09-13
    Type: Author supporting evidence