5F4B

Structure of B. abortus WrbA-related protein A (WrpA)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.498 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.230 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.

Herrou, J.Czyz, D.M.Willett, J.W.Kim, H.S.Chhor, G.Babnigg, G.Kim, Y.Crosson, S.

(2016) J.Bacteriol. 198: 1281-1293


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
NAD(P)H dehydrogenase (quinone)
A, B
202Brucella abortus (strain 2308)Mutation(s): 0 
EC: 1.6.5.2
Find proteins for Q2YQ23 (Brucella abortus (strain 2308))
Go to UniProtKB:  Q2YQ23
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMN
Query on FMN

Download SDF File 
Download CCD File 
A, B
FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 63.580α = 90.00
b = 63.580β = 90.00
c = 188.537γ = 90.00
Software Package:
Software NamePurpose
HKL-3000phasing
HKL-3000data collection
PHENIXrefinement
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesU19AI107792
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesR01AI107159

Revision History 

  • Version 1.0: 2016-03-09
    Type: Initial release
  • Version 1.1: 2016-04-20
    Type: Database references
  • Version 1.2: 2017-09-27
    Type: Author supporting evidence, Database references, Derived calculations