5F1P

Crystal Structure of Dehydrogenase from Streptomyces platensis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.099 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of a Dehydrogenase, PtmO8, from Streptomyces platensis

Kim, Y.Li, H.Endres, M.Babnigg, G.Rudolf, J.Ma, M.Chang, C.-Y.Shen, B.Phillips Jr., G.N.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PtmO8
A, B
265Streptomyces platensisMutation(s): 3 
Find proteins for A0A0A0UVL0 (Streptomyces platensis)
Go to UniProtKB:  A0A0A0UVL0
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.099 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 77.368α = 90.00
b = 77.953β = 105.47
c = 81.575γ = 90.00
Software Package:
Software NamePurpose
HKL-3000phasing
PHENIXrefinement
HKL-3000data scaling
MLPHAREphasing
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of HealthUnited States--

Revision History 

  • Version 1.0: 2015-12-30
    Type: Initial release
  • Version 1.1: 2017-02-22
    Type: Database references, Structure summary