5F17 | pdb_00005f17

Structure of EAV NSP11 K170A mutant at 3.19A

PDB DOI: https://doi.org/10.2210/pdb5F17/pdb

Classification: HYDROLASE
Organism(s): Equine arteritis virus Bucyrus
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2015-11-30 Released: 2016-11-16
Deposition Author(s): Zhang, M.F., Chen, Z.Z.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.20 Å
R-Value Free:
0.243 (Depositor), 0.240 (DCC)
R-Value Work:
0.215 (Depositor), 0.216 (DCC)
R-Value Observed:
0.216 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 5F17

This is version 1.1 of the entry. See complete history.

Literature

Structure of EAV NSP11 K170A mutant at 3.19A

Zhang, M.F., Chen, Z.Z.

To be published.

Macromolecule Content

Total Structure Weight: 144.87 kDa
Atom Count: 9,879
Modeled Residue Count: 1,286
Deposited Residue Count: 1,314
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Non-structural protein 11	A, B, C, D, E A, B, C, D, E, F	219	Equine arteritis virus Bucyrus	Mutation(s): 1 Gene Names: rep, 1a-1b
UniProt
Find proteins for P19811 (Equine arteritis virus (strain Bucyrus)) Explore P19811 Go to UniProtKB: P19811
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P19811
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.20 Å
R-Value Free: 0.243 (Depositor), 0.240 (DCC)
R-Value Work: 0.215 (Depositor), 0.216 (DCC)
R-Value Observed: 0.216 (Depositor)

Space Group: H 3 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 249.184	α = 90
b = 249.184	β = 90
c = 226.899	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
BALBES	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2016-11-16

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2016-11-16
Type: Initial release
Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.