5EQZ | pdb_00005eqz

Crystal structure of a Rev protein from Borrelia burgdorferi at 1.80 A resolution

• PDB DOI: https://doi.org/10.2210/pdb5EQZ/pdb

• Classification: TRANSCRIPTION
• Organism(s): Borreliella burgdorferi B31
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2015-11-13 Released: 2015-12-09 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free: 
  0.242 (Depositor), 0.240 (DCC) 
• R-Value Work: 
  0.203 (Depositor), 0.200 (DCC) 
• R-Value Observed: 
  0.207 (Depositor) 

Literature

Crystal structure of a Rev protein from Borrelia burgdorferi at 1.80 A resolution

Yano, J.K., Sullivan, A.H., Abendroth, J., Lorimer, D.D., Edwards, T.E.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 16.38 kDa 
• Atom Count: 1,166 
• Modeled Residue Count: 138 
• Deposited Residue Count: 146 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rev protein	A	146	Borreliella burgdorferi B31	Mutation(s): 0  Gene Names: BB_M27
UniProt
Find proteins for Q9S0B8 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore Q9S0B8  Go to UniProtKB:  Q9S0B8

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free:  0.242 (Depositor), 0.240 (DCC) 
• R-Value Work:  0.203 (Depositor), 0.200 (DCC) 
• R-Value Observed: 0.207 (Depositor) 

Diffraction Data: https://doi.org/10.18430/M35EQZ

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.97	α = 90
b = 42.51	β = 109.21
c = 64.14	γ = 90

Software Package:

Software Name	Purpose
XSCALE	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
PHASER	phasing
Coot	model building

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-12-09 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2015-12-09
  Type: Initial release
  
• Version 1.1: 2017-10-11
  Changes: Data collection, Derived calculations
• Version 1.2: 2024-03-06
  Changes: Data collection, Database references