5EOR

Structure of the murine antibody Fab 8E3 bound to the vaccinia virus A27 peptide 101-110


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Linear Epitopes in Vaccinia Virus A27 Are Targets of Protective Antibodies Induced by Vaccination against Smallpox.

Kaever, T.Matho, M.H.Meng, X.Crickard, L.Schlossman, A.Xiang, Y.Crotty, S.Peters, B.Zajonc, D.M.

(2016) J.Virol. 90: 4334-4345


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
anti vaccinia virus A27 antibody 8E3 heavy chain
H
215N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
anti vaccinia virus A27 antibody 8E3 light chain
L
217N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Protein A27
A
10Vaccinia virus (strain Western Reserve)Mutation(s): 0 
Find proteins for P11258 (Vaccinia virus (strain Western Reserve))
Go to UniProtKB:  P11258
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
H
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.203 
  • Space Group: P 61 2 2
Unit Cell:
Length (Å)Angle (°)
a = 118.250α = 90.00
b = 118.250β = 90.00
c = 198.740γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
PHASERphasing
MOSFLMdata reduction
SCALAdata scaling
Blu-Icedata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of HealthUnited StatesHHSN272200900048C

Revision History 

  • Version 1.0: 2016-03-02
    Type: Initial release
  • Version 1.1: 2016-03-23
    Type: Database references
  • Version 1.2: 2016-04-27
    Type: Database references