5EN1

Crystal structure of hnRNPA2B1 in complex with RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.58 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.194 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1

Wu, B.X.Su, S.C.Patil, D.P.Liu, H.H.Gan, J.H.Jaffrey, S.R.Ma, J.B.

(2018) Nat Commun 


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Heterogeneous nuclear ribonucleoproteins A2/B1184Homo sapiensMutation(s): 0 
Gene Names: HNRNPA2B1HNRPA2B1
UniProt & NIH Common Fund Data Resources
Find proteins for P22626 (Homo sapiens)
Explore P22626 
Go to UniProtKB:  P22626
GTEx:  ENSG00000122566 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP22626
Sequence Annotations
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  • Reference Sequence

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Entity ID: 2
MoleculeChains LengthOrganismImage
RNA (5'-R(*AP*GP*GP*AP*CP*UP*G)-3')7Homo sapiens
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.58 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.194 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 122.623α = 90
b = 46.38β = 96.02
c = 37.516γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
HKL-3000data scaling
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-11-09
    Type: Initial release
  • Version 1.1: 2018-02-07
    Changes: Database references, Derived calculations
  • Version 1.2: 2023-11-08
    Changes: Data collection, Database references, Refinement description