5D67

Crystal structure of an EF-Hand calcium binding domain of CAP-Binding Protein Complex-Interacting Protein 1 (EFCAB6) from Homo sapiens at 2.00 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of an EF-Hand calcium binding domain of CAP-Binding Protein Complex-Interacting Protein 1 (EFCAB6) from Homo sapiens at 2.00 A resolution

Joint Center for Structural Genomics (JCSG)Partnership for Nuclear Receptor Signaling Code Biology

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
EF-hand calcium-binding domain-containing protein 6
A, B, C, D
102Homo sapiensMutation(s): 1 
Gene Names: EFCAB6 (DJBP, KIAA1672)
Find proteins for Q5THR3 (Homo sapiens)
Go to Gene View: EFCAB6
Go to UniProtKB:  Q5THR3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C, D
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 43.407α = 90.00
b = 67.187β = 100.05
c = 70.697γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
SHELXDphasing
PDB_EXTRACTdata extraction
BUSTERrefinement
SHELXphasing
SHARPphasing
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2015-09-02
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Derived calculations, Refinement description
  • Version 1.2: 2018-01-24
    Type: Database references