Download MendeleyThe crystal structure of an N-terminal ketoreductase from macrolactin polyketide synthase
Zeng, J., Keatinge-clay, A.T.To be published.
5D2E
crystal structure of an N-terminal ketoreductase from macrolactin assembly line
- PDB DOI: https://doi.org/10.2210/pdb5D2E/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus velezensis FZB42
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): No
- Deposited: 2015-08-05 Released: 2015-08-26
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.72 Å
- R-Value Free: 0.216
- R-Value Work: 0.183
- R-Value Observed: 0.185
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MlnE | 522 | Bacillus velezensis FZB42 | Mutation(s): 0 Gene Names: mlnE, RBAM_014370 |  | |
UniProt | |||||
Find proteins for A7Z474 (Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)) Explore A7Z474 Go to UniProtKB: A7Z474 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A7Z474 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAP Query on NAP | B [auth A] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N |  | ||
| PG4 Query on PG4 | D [auth A] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.72 Å
- R-Value Free: 0.216
- R-Value Work: 0.183
- R-Value Observed: 0.185
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 92.627 | α = 90 |
| b = 110.933 | β = 90 |
| c = 139.31 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2015-08-26 Deposition Author(s): Keatinge-clay, A.T., Zeng, J.
Revision History (Full details and data files)
- Version 1.0: 2015-08-26
Type: Initial release - Version 1.1: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Refinement description
