5CM0

Crystal structure of branched-chain aminotransferase from thermophilic archaea Geoglobus acetivorans


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.151 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of branched-chain aminotransferase from thermophilic archaea Geoglobus acetivorans.

Boyko, K.M.Nikolaeva, A.Y.Stekhanova, T.N.Mardanov, A.V.Rakitin, A.L.Bezsudnova, E.Y.Ravin, N.V.Popov, V.O.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Branched-chain transaminase
A, B, C
292Geoglobus acetivoransMutation(s): 0 
Gene Names: ilvE
EC: 2.6.1.42
Find proteins for A0A0A7GJ30 (Geoglobus acetivorans)
Go to UniProtKB:  A0A0A7GJ30
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, C
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
PLP
Query on PLP

Download SDF File 
Download CCD File 
A, B, C
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.151 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 117.650α = 90.00
b = 117.650β = 90.00
c = 135.980γ = 120.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
MOLREPphasing
HKL-2000data reduction
XSCALEdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Russian Scientific FundRussian Federation--
ERA-IB ("Thermogene") 7th EU Framework Programme--

Revision History 

  • Version 1.0: 2016-09-14
    Type: Initial release
  • Version 1.1: 2017-03-15
    Type: Structure summary