5CLT

Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.196 

wwPDB Validation 3D Report Full Report



Literature

Crystal structure of human glycogen branching enzyme (GBE1) in complex with acarbose

Krojer, T.Froese, D.S.Goubin, S.Strain-Damerell, C.Mahajan, P.Burgess-Brown, N.von Delft, F.Bountra, C.Arrowsmith, C.H.Edwards, A.Yue, W.Structural Genomics Consortium (SGC)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
1,4-alpha-glucan-branching enzyme
A, B, C
668Homo sapiensMutation(s): 0 
Gene Names: GBE1
EC: 2.4.1.18
Find proteins for Q04446 (Homo sapiens)
Go to UniProtKB:  Q04446
NIH Common Fund Data Resources
PHAROS  Q04446
Protein Feature View
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACR
Query on ACR

Download CCD File 
A, B, C
ALPHA-ACARBOSE
C25 H43 N O18
XUFXOAAUWZOOIT-WVJZLWNXSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.196 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 116.76α = 90
b = 163.99β = 90
c = 311.7γ = 90
Software Package:
Software NamePurpose
Aimlessdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-08-12
    Type: Initial release