5CG7

Leishmania siamensis Triosephosphate isomerase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.168 
  • R-Value Observed: 0.170 

wwPDB Validation 3D Report Full Report



Literature

Crystal structure of Leishmania siamensis Triosephosphate isomerase at 1.88 Angstroms

Kuaprasert, B.Riangrungroj, P.Pornthanakasem, W.Sirimontree, P.Attarataya, J.Mungthin, M.Leelayoova, S.Suginta, W.Choowongkomon, K.Leartsakulpanich, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Triosephosphate isomeraseAB271Leishmania sp. 'siamensisMutation(s): 0 
Gene Names: tim
EC: 5.3.1.1
Find proteins for I2APN2 (Leishmania sp. 'siamensis')
Explore I2APN2 
Go to UniProtKB:  I2APN2
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download CCD File 
A, B
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CAS
Query on CAS
A,BL-PEPTIDE LINKINGC5 H12 As N O2 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.168 
  • R-Value Observed: 0.170 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 81.44α = 90
b = 76.45β = 101.14
c = 94.94γ = 90
Software Package:
Software NamePurpose
AUTOMARdata collection
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Synchrotron Light Research Institute (Public Organization)ThailandSLRI; GRANT 2-2549/LS01
National Center for Genetic Engineering and Biotechnology (BIOTEC)ThailandP-00-0029

Revision History 

  • Version 1.0: 2016-07-13
    Type: Initial release