5CG7

Leishmania siamensis Triosephosphate isomerase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.168 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of Leishmania siamensis Triosephosphate isomerase at 1.88 Angstroms

Kuaprasert, B.Riangrungroj, P.Pornthanakasem, W.Sirimontree, P.Attarataya, J.Mungthin, M.Leelayoova, S.Suginta, W.Choowongkomon, K.Leartsakulpanich, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Triosephosphate isomerase
A, B
271Leishmania sp. 'siamensis'Mutation(s): 0 
Gene Names: tim
EC: 5.3.1.1
Find proteins for I2APN2 (Leishmania sp. 'siamensis')
Go to UniProtKB:  I2APN2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CAS
Query on CAS
A, B
L-PEPTIDE LINKINGC5 H12 As N O2 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.168 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 81.440α = 90.00
b = 76.450β = 101.14
c = 94.940γ = 90.00
Software Package:
Software NamePurpose
AUTOMARdata collection
MOLREPphasing
SCALAdata scaling
REFMACrefinement
MOSFLMdata reduction
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Synchrotron Light Research Institute (Public Organization)ThailandSLRI; GRANT 2-2549/LS01
National Center for Genetic Engineering and Biotechnology (BIOTEC)ThailandP-00-0029

Revision History 

  • Version 1.0: 2016-07-13
    Type: Initial release