5CD3

Structure of immature VRC01-class antibody DRVIA7


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.234 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Key gp120 Glycans Pose Roadblocks to the Rapid Development of VRC01-Class Antibodies in an HIV-1-Infected Chinese Donor.

Kong, L.Ju, B.Chen, Y.He, L.Ren, L.Liu, J.Hong, K.Su, B.Wang, Z.Ozorowski, G.Ji, X.Hua, Y.Chen, Y.Deller, M.C.Hao, Y.Feng, Y.Garces, F.Wilson, R.Dai, K.O'Dell, S.McKee, K.Mascola, J.R.Ward, A.B.Wyatt, R.T.Li, Y.Wilson, I.A.Zhu, J.Shao, Y.

(2016) Immunity 44: 939-950


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DRVIA7 Heavy Chain
G, A, C, E
220N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
DRVIA7 Light Chain
H, B, D, F
210N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.234 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 66.829α = 89.84
b = 73.747β = 89.40
c = 101.158γ = 89.95
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data reduction
HKL-2000data scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2015-07-02 
  • Released Date: 2016-04-06 
  • Deposition Author(s): Kong, L., Wilson, I.A.

Revision History 

  • Version 1.0: 2016-04-06
    Type: Initial release
  • Version 1.1: 2018-09-05
    Type: Data collection, Database references, Derived calculations