5BXU

Human Tankyrase-2 in Complex with Macrocyclised Extended Peptide cp4n4m5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.156 

wwPDB Validation 3D Report Full Report


This is version 2.0 of the entry. See complete history

Literature

Human Tankyrase-2 in Complex with Extended Stapled Peptide sp4n4m5

Xu, W.Lau, Y.H.Fischer, G.Chattopadhyay, A.Tan, Y.S.Verma, C.Hyvonen, M.Spring, D.S.Itzhaki, L.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tankyrase-2
A
164Homo sapiensMutation(s): 0 
Gene Names: TNKS2 (PARP5B, TANK2, TNKL)
EC: 2.4.2.30
Find proteins for Q9H2K2 (Homo sapiens)
Go to Gene View: TNKS2
Go to UniProtKB:  Q9H2K2
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
cp4n4m5
B
9N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
4XQ
Query on 4XQ

Download SDF File 
Download CCD File 
B
4,4'-pentane-1,5-diylbis(1-propyl-1H-1,2,3-triazole)
C15 H26 N6
MUTHZRDXMHMSAA-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
GMA
Query on GMA
B
L-PEPTIDE LINKINGC5 H10 N2 O3GLU
ACE
Query on ACE
B
NON-POLYMERC2 H4 O

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.156 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 31.086α = 90.00
b = 63.279β = 90.00
c = 72.325γ = 90.00
Software Package:
Software NamePurpose
AutoPROCdata reduction
PHASERphasing
Aimlessdata scaling
XDSdata reduction
REFMACrefinement
CCP4data scaling
Cootmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (United Kingdom)United KingdomG1002329

Revision History 

  • Version 1.0: 2016-06-29
    Type: Initial release
  • Version 2.0: 2017-09-13
    Type: Advisory, Atomic model, Author supporting evidence, Data collection, Derived calculations