5BQ3

Crystal structure of a sugar ABC transporter (ACTODO_00688) from Actinomyces odontolyticus ATCC 17982 at 2.60 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of a sugar ABC transporter (ACTODO_00688) from Actinomyces odontolyticus ATCC 17982 at 2.60 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Rhamnose ABC transporter, rhamnose-binding protein
A, B, C, D
332Actinomyces odontolyticus ATCC 17982Mutation(s): 0 
Gene Names: rhaS
Find proteins for A7BAM4 (Actinomyces odontolyticus ATCC 17982)
Go to UniProtKB:  A7BAM4
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 84.780α = 90.00
b = 83.280β = 111.87
c = 104.220γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
BUSTERrefinement
SHELXphasing
XDSdata reduction
SHARPphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-08-05
    Type: Initial release
  • Version 1.1: 2017-10-11
    Type: Derived calculations, Refinement description
  • Version 1.2: 2018-01-24
    Type: Database references