Macromolecule Content

Total Structure Weight: 23.41 kDa
Atom Count: 1835
Modelled Residue Count: 207
Deposited Residue Count: 207
Unique protein chains: 1

5B5L

Crystal structure of acetyl esterase mutant S10A with acetate ion

PDB DOI: 10.2210/pdb5B5L/pdb

Classification: HYDROLASE
Organism(s): Talaromyces cellulolyticus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2016-05-12 Released: 2017-05-31
Deposition Author(s): Uechi, K., Kamachi, S., Akita, H., Mine, S., Watanabe, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.174
R-Value Work: 0.121
R-Value Observed: 0.124

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

crystal structure of acetyl esterase mutant S10A with acetate ion

Uechi, K., Kamachi, S., Akita, H., Mine, S., Watanabe, M.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
acetyl esterase	A	207	Talaromyces cellulolyticus	Mutation(s): 1 Gene Names: axe, TCE0_004r00149
UniProt
Find proteins for A0A0A8IBJ8 (Talaromyces cellulolyticus) Explore A0A0A8IBJ8 Go to UniProtKB: A0A0A8IBJ8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A0A8IBJ8
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PEG Query on PEG Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain F [auth A] SDF format, chain G [auth A] SDF format, chain H [auth A] SDF format, chain I [auth A] SDF format, chain J [auth A] SDF format, chain K [auth A] MOL2 format, chain E [auth A] MOL2 format, chain F [auth A] MOL2 format, chain G [auth A] MOL2 format, chain H [auth A] MOL2 format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A]	E [auth A], F [auth A], G [auth A], H [auth A], I [auth A], E [auth A], F [auth A], G [auth A], H [auth A], I [auth A], J [auth A], K [auth A]	DI(HYDROXYETHYL)ETHER C₄ H₁₀ O₃ MTHSVFCYNBDYFN-UHFFFAOYSA-N		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain D [auth A] MOL2 format, chain D [auth A]	D [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction
ACT Query on ACT Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A]	B [auth A]	ACETATE ION C₂ H₃ O₂ QTBSBXVTEAMEQO-UHFFFAOYSA-M		Ligand Interaction
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A]	C [auth A]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.174
R-Value Work: 0.121
R-Value Observed: 0.124
Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 64.589	α = 90
b = 64.589	β = 90
c = 89.644	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2016-05-12
Released Date: 2017-05-31

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-05-31
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.