5ARL

crystal structure of porcine RNase 4 D80A mutant in complex with dCMP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.61 Å
  • R-Value Free: 0.300 
  • R-Value Work: 0.252 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural Basis of Substrate Specificity in Porcine Rnase 4.

Liang, S.Acharya, K.R.

(2016) FEBS J. 283: 912


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RIBONUCLEASE 4
A, B, C, D
134Sus scrofaMutation(s): 1 
Gene Names: RNASE4 (RNS4)
EC: 3.1.27.-
Find proteins for P15468 (Sus scrofa)
Go to Gene View: RNASE4
Go to UniProtKB:  P15468
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DCM
Query on DCM

Download SDF File 
Download CCD File 
A, B, C, D
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
C9 H14 N3 O7 P
NCMVOABPESMRCP-SHYZEUOFSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.61 Å
  • R-Value Free: 0.300 
  • R-Value Work: 0.252 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 30.962α = 89.78
b = 62.515β = 79.21
c = 70.216γ = 78.90
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
Aimlessdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-01-20
    Type: Initial release
  • Version 1.1: 2016-03-23
    Type: Database references