4WXT | pdb_00004wxt

X-ray crystal structure of thioredoxin from Mycobacterium avium

• PDB DOI: https://doi.org/10.2210/pdb4WXT/pdb

• Classification: HYDROLASE
• Organism(s): Mycobacterium avium subsp. hominissuis 3388
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-11-14 Released: 2014-11-26 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.20 Å
• R-Value Free: 
  0.177 (Depositor), 0.180 (DCC) 
• R-Value Work: 
  0.157 (Depositor), 0.160 (DCC) 
• R-Value Observed: 
  0.158 (Depositor) 

Starting Model: experimental

Literature

X-ray crystal structure of thioredoxin from Mycobacterium avium

Lukacs, C.M., Arakaki, T., Don Lorimer, D.D., Edwards, T.E.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 13.52 kDa 
• Atom Count: 968 
• Modeled Residue Count: 108 
• Deposited Residue Count: 125 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Thioredoxin	A	125	Mycobacterium avium subsp. hominissuis 3388	Mutation(s): 0  Gene Names: MAV3388_24025
UniProt
Find proteins for A0A067HWN0 (Mycobacterium avium subsp. hominissuis 3388) Explore A0A067HWN0  Go to UniProtKB:  A0A067HWN0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.20 Å
• R-Value Free:  0.177 (Depositor), 0.180 (DCC) 
• R-Value Work:  0.157 (Depositor), 0.160 (DCC) 
• R-Value Observed: 0.158 (Depositor) 

Diffraction Data: https://doi.org/10.18430/M34WXT

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 26.07	α = 82.64
b = 29.86	β = 87.64
c = 31.08	γ = 66.84

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XSCALE	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-11-26 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2014-11-26
  Type: Initial release
  
• Version 1.1: 2023-09-27
  Changes: Data collection, Database references, Derived calculations, Refinement description, Source and taxonomy
• Version 1.2: 2024-11-06
  Changes: Structure summary