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Download EndnoteX-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate
Fairman, J.W., Taylor, B.M., Edwards, T.E., Lorimer, D.To be published.
4TM5
X-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate
- DOI: 10.2210/pdb4TM5/pdb
- Classification: TRANSFERASE
- Organism(s): Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
- Expression System: Escherichia coli
- Deposited: 2014-05-31 Released: 2014-07-02
- Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.603 Å
- R-Value Free: 0.190
- R-Value Work: 0.154
wwPDB Validation 3D Report Full Report
This is version 2.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| D-amino acid aminotransferase | A | 311 | Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) | Mutation(s): 0 |
Find proteins for Q2T1L0 (Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)) Go to UniProtKB: Q2T1L0 | ||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| LLP Query on LLP | A | L-PEPTIDE LINKING | C14 H22 N3 O7 P |  | LYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.603 Å
- R-Value Free: 0.190
- R-Value Work: 0.154
- Space Group: C 2 2 21
- Diffraction Data DOI:
10.18430/M34TM5 Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 61.830 | α = 90.00 |
| b = 70.020 | β = 90.00 |
| c = 140.010 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XSCALE | data scaling |
Entry History & Funding Information
Deposition Data
- Deposited Date: 2014-05-31
- Released Date: 2014-07-02
- Deposition Author(s): Fairman, J.W., Taylor, B.M., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | -- |
