4NWE

Lysozyme UNDER 30 BAR PRESSURE OF NITROUS OXIDE

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.170 
  • R-Value Observed: 0.171 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Crystallographic Studies with Xenon and Nitrous Oxide Provide Evidence for Protein-dependent Processes in the Mechanisms of General Anesthesia

Abraini, J.H., Marassio, G., David, H.N., Vallone, B., Prange, T., Colloc'h, N.

(2014) Anesthesiology 121: 1018-1027

  • DOI: 10.1097/ALN.0000000000000435
  • Structures With Same Primary Citation

  • PubMed Abstract: 

    • The mechanisms by which general anesthetics, including xenon and nitrous oxide, act are only beginning to be discovered. However, structural approaches revealed weak but specific protein-gas interactions.

    The mechanisms by which general anesthetics, including xenon and nitrous oxide, act are only beginning to be discovered. However, structural approaches revealed weak but specific protein-gas interactions.

    Organizational Affiliation: 

    From the Faculté de Médecine, Université de Caen Basse Normandie, Normandie-Université, Caen, France (J.H.A., G.M.); Institut de Recherche Biomédicale des Armées, Brétigny-sur-Orge, France (J.H.A.); Département d'Anesthésiologie, Université Laval, Quebec City, Québec, Canada (J.H.A., H.N.D.); Centre de Recherche Hôtel-Dieu de Lévis, CSSS Alphonse-Desjardins, Lévis, Québec, Canada (H.N.D.); Department of Biochemical Sciences, University of Rome La Sapienza, Rome, Italy (B.V.); LCRB UMR 8015, Université Paris Descartes-CNRS, Faculté de Pharmacie, Paris, France (T.P.); ISTCT UMR 6301, CNRS, CERVOxy group, GIP Cyceron, Caen, France (N.C.); ISTCT UMR 6301, Université de Caen Basse Normandie, Normandie-Université, Caen, France (N.C.); and ISTCT UMR 6301, CEA DSV/I2BM, Caen, France (N.C.).



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Lysozyme C
A
129Gallus gallusMutation(s): 0 
Gene Names: LYZ
EC: 3.2.1.17
Find proteins for P00698 (Gallus gallus)
Go to UniProtKB:  P00698
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
N2O
Query on N2O
Download CCD File 
A
NITROUS OXIDE
N2 O
GQPLMRYTRLFLPF-UHFFFAOYSA-N		 Ligand Interaction
CL
Query on CL
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M		 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.170 
  • R-Value Observed: 0.171 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 79.188α = 90
b = 79.188β = 90
c = 37.941γ = 90
Software Package:
Software NamePurpose
MAR345dtbdata collection
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
REFMACphasing

Structure Validation

View Full Validation Report


View more in-depth experimental data

Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-09-24
    Type: Initial release
  • Version 1.1: 2014-12-17
    Changes: Database references