4N9N

Crystal Structure of Saccharomyces cerevisiae Upc2 Transcription Factor fused with T4 Lysozyme


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.251 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural mechanism of ergosterol regulation by fungal sterol nuclear receptor Upc2

Yang, H.Tong, J.Ha, S.Eom, S.H.Im, Y.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sterol uptake control protein 2, Lysozyme
A, B
438Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Enterobacteria phage T4
This entity is chimeric
Mutation(s): 2 
Gene Names: UPC2 (MOX4), E
EC: 3.2.1.17
Find proteins for Q12151 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to UniProtKB:  Q12151
Find proteins for P00720 (Enterobacteria phage T4)
Go to UniProtKB:  P00720
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.251 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 67.170α = 90.00
b = 67.170β = 90.00
c = 257.510γ = 120.00
Software Package:
Software NamePurpose
SCALAdata scaling
MOSFLMdata reduction
SOLVEphasing
CNSrefinement
ADSCdata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2013-10-21 
  • Released Date: 2014-12-03 
  • Deposition Author(s): Yang, H., Im, Y.J.

Revision History 

  • Version 1.0: 2014-12-03
    Type: Initial release
  • Version 1.1: 2017-08-16
    Type: Refinement description, Source and taxonomy