4MWA

1.85 Angstrom Crystal Structure of GCPE Protein from Bacillus anthracis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.169 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.127 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseA, G276Bacillus anthracis str. SterneMutation(s): 0 
Gene Names: BAS4180BA_4502GBAA_4502gcpEispG
EC: 1.17.7.1 (PDB Primary Data), 1.17.7.3 (UniProt)
Find proteins for Q81LV7 (Bacillus anthracis)
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Protein Feature View
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseB276Bacillus anthracis str. SterneMutation(s): 0 
Gene Names: BAS4180BA_4502GBAA_4502gcpEispG
EC: 1.17.7.1 (PDB Primary Data), 1.17.7.3 (UniProt)
Find proteins for Q81LV7 (Bacillus anthracis)
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Protein Feature View
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  • Reference Sequence
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseC276Bacillus anthracis str. SterneMutation(s): 0 
Gene Names: BAS4180BA_4502GBAA_4502gcpEispG
EC: 1.17.7.1 (PDB Primary Data), 1.17.7.3 (UniProt)
Find proteins for Q81LV7 (Bacillus anthracis)
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Protein Feature View
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  • Reference Sequence
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseD, F, H276Bacillus anthracis str. SterneMutation(s): 0 
Gene Names: BAS4180BA_4502GBAA_4502gcpEispG
EC: 1.17.7.1 (PDB Primary Data), 1.17.7.3 (UniProt)
Find proteins for Q81LV7 (Bacillus anthracis)
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  • Reference Sequence
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseE276Bacillus anthracis str. SterneMutation(s): 0 
Gene Names: BAS4180BA_4502GBAA_4502gcpEispG
EC: 1.17.7.1 (PDB Primary Data), 1.17.7.3 (UniProt)
Find proteins for Q81LV7 (Bacillus anthracis)
Explore Q81LV7 
Go to UniProtKB:  Q81LV7
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AA [auth G] , BA [auth G] , CA [auth H] , I [auth A] , K [auth B] , N [auth C] , O [auth C] , S [auth D] , 
AA [auth G],  BA [auth G],  CA [auth H],  I [auth A],  K [auth B],  N [auth C],  O [auth C],  S [auth D],  T [auth D],  U [auth E],  V [auth E],  W [auth F],  X [auth F]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

Download Ideal Coordinates CCD File 
J [auth A], L [auth B], M [auth B], P [auth C], Q [auth C], R [auth C], Y [auth F], Z [auth F]CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
KCX
Query on KCX
A, GL-PEPTIDE LINKINGC7 H14 N2 O4LYS
MSE
Query on MSE
A, GL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.169 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.127 
  • Space Group: P 3
  • Diffraction Data DOI: 10.18430/M34MWA Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 162.676α = 90
b = 162.676β = 90
c = 76.484γ = 120
Software Package:
Software NamePurpose
Blu-Icedata collection
PHENIXmodel building
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2013-10-09
    Type: Initial release
  • Version 1.1: 2017-11-15
    Changes: Refinement description