Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with Mg,d-mannonate and 2-keto-3-deoxy-d-gluconate
Fedorov, A.A., Fedorov, E.V., Wichelecki, D., Gerlt, J.A., Almo, S.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
D-mannonate dehydratase | 405 | Chromohalobacter israelensis DSM 3043 | Mutation(s): 0  Gene Names: Csal_2974 EC: 4.2.1.8 | ||
UniProt | |||||
Find proteins for Q1QT89 (Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11)) Explore Q1QT89  Go to UniProtKB:  Q1QT89 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q1QT89 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CS2 Query on CS2 | I [auth A], L [auth B], T [auth E], V [auth F] | D-MANNONIC ACID C6 H12 O7 RGHNJXZEOKUKBD-MBMOQRBOSA-N | |||
KDG Query on KDG | BA [auth H], N [auth C], Q [auth D], Y [auth G] | 2-KETO-3-DEOXYGLUCONATE C6 H10 O6 WPAMZTWLKIDIOP-WVZVXSGGSA-N | |||
GOL Query on GOL | Z [auth G] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CL Query on CL | J [auth A], O [auth C], R [auth D], W [auth F] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
MG Query on MG | AA [auth G] CA [auth H] K [auth A] M [auth B] P [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 110.242 | α = 90 |
b = 167.263 | β = 90 |
c = 168.863 | γ = 90 |
Software Name | Purpose |
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CBASS | data collection |
BALBES | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |