Dihydrolipoyl dehydrogenase of Escherichia coli pyruvate dehydrogenase complex
Tietzel, M., Meyer, D., Schroeder-Tittmann, K., Neumann, P., Ficner, R., Tittmann, K.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
Dihydrolipoyl dehydrogenase | A, B, C, D, E, F | 474 | Escherichia coli | Mutation(s): 0  Gene Names: lpdA (lpd, lpd_1, lpdA_2) EC: 1.8.1.4 |
Find proteins for C3TQA2 (Escherichia coli) Go to UniProtKB:  C3TQA2 |
Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | A, B, C, D, E, F | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | ![]() |  Ligand Interaction | |
CL Query on CL | A, C, E, F | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | ![]() |  Ligand Interaction | |
FAD Query on FAD | A, B, C, D, E, F | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N | ![]() |  Ligand Interaction | |
GOL Query on GOL | A, B, C, D, E, F | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
IMD Query on IMD | A, C, E | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O | ![]() |  Ligand Interaction |
Length (Å) | Angle (°) |
---|---|
a = 111.680 | α = 90.00 |
b = 129.320 | β = 90.00 |
c = 258.340 | γ = 90.00 |
Software Name | Purpose |
---|---|
PHASER | phasing |
MxCuBE | data collection |
PDB_EXTRACT | data extraction |
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |