4JCW

Crystal structure of Clavibacter michiganensis expansin in complex with cellopentaose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of wild type and D78N mutant Clavibacter michiganensis expansin, in apo form and in complex with oligosaccharides

Yennawar, N.H.Yennawar, H.P.Georgelis, N.Cosgrove, D.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cellulose binding protein
A, B
202Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)Mutation(s): 0 
Gene Names: celA
EC: 3.2.1.4
Find proteins for A5CLK3 (Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382))
Go to UniProtKB:  A5CLK3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CE5
Query on CE5

Download SDF File 
Download CCD File 
B
CELLOPENTAOSE
C30 H52 O26
FTNIPWXXIGNQQF-FFFJRYSISA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.173 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 35.936α = 88.75
b = 43.212β = 81.29
c = 64.300γ = 82.70
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXphasing
PHENIXmodel building
HKL-2000data reduction
CrystalCleardata collection
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-03-05
    Type: Initial release
  • Version 1.1: 2015-06-24
    Type: Derived calculations
  • Version 1.2: 2015-10-21
    Type: Structure summary