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Download EndnoteCrystal structure of an ABC-type phosphate transport system, periplasmic component (LVIS_0633) from Lactobacillus brevis ATCC 367 at 1.55 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
4ECF
Crystal structure of an ABC-type phosphate transport system, periplasmic component (LVIS_0633) from Lactobacillus brevis ATCC 367 at 1.55 A resolution
- DOI: 10.2210/pdb4ECF/pdb
- Classification: PHOSPHATE-BINDING PROTEIN
- Organism(s): Lactobacillus brevis (strain ATCC 367 / JCM 1170)
- Expression System: Escherichia coli
- Deposited: 2012-03-26 Released: 2012-04-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.196
- R-Value Work: 0.162
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| ABC-type phosphate transport system, periplasmic component | A | 264 | Lactobacillus brevis (strain ATCC 367 / JCM 1170) | Mutation(s): 0 |
Find proteins for Q03SP4 (Lactobacillus brevis (strain ATCC 367 / JCM 1170)) Go to UniProtKB: Q03SP4 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| ACT Query on ACT | A | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| EDO Query on EDO | A | 1,2-ETHANEDIOL ETHYLENE GLYCOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.196
- R-Value Work: 0.162
- Space Group: P 1 21 1
- Diffraction Data DOI:
10.18430/M34ECF Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 46.204 | α = 90.00 |
| b = 43.752 | β = 102.57 |
| c = 71.475 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| SHELXD | phasing |
| PDB_EXTRACT | data extraction |
| SHELX | phasing |
| XSCALE | data scaling |
| MolProbity | model building |
| REFMAC | refinement |
| XDS | data reduction |
| SHARP | phasing |
Entry History
Deposition Data
- Deposited Date: 2012-03-26
- Released Date: 2012-04-11
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
