4ZZQ

Dictyostelium discoideum cellobiohydrolase Cel7A apo structure


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.351 
  • R-Value Work: 0.256 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Biochemical and Structural Characterization of Two Dictyostelium Cellobiohydrolases from the Amoebozoa Kingdom Reveal a High Conservation between Distant Phylogenetic Trees of Life.

Hobdey, S.E.Knott, B.C.Haddad Momeni, M.Taylor, L.E.Borisova, A.S.Podkaminer, K.K.VanderWall, T.A.Himmel, M.E.Decker, S.R.Beckham, G.T.Stahlberg, J.

(2016) Appl.Environ.Microbiol. 82: 3395-4409


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
CELLULOSE 1,4-BETA-CELLOBIOSIDASE
A
438Dictyostelium discoideumMutation(s): 0 
Find proteins for Q55FE6 (Dictyostelium discoideum)
Go to UniProtKB:  Q55FE6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PEG
Query on PEG

Download SDF File 
Download CCD File 
A
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
NAG
Query on NAG

Download SDF File 
Download CCD File 
A
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
PCA
Query on PCA
A
L-PEPTIDE LINKINGC5 H7 N O3GLU
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.351 
  • R-Value Work: 0.256 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 44.227α = 90.00
b = 62.894β = 90.00
c = 132.900γ = 90.00
Software Package:
Software NamePurpose
REFMACphasing
SCALAdata scaling
MOSFLMdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-04-13
    Type: Initial release
  • Version 1.1: 2016-06-01
    Type: Database references
  • Version 1.2: 2018-01-17
    Type: Data collection, Database references