4ZTI

Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121

  • Classification: VIRAL PROTEIN
  • Organism(s): Ebola virus - Mayinga, Zaire, 1976
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2015-05-14 Released: 2015-05-27 
  • Deposition Author(s): Kirchdoerfer, R.N., Abelson, D.M., Saphire, E.O.
  • Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID), Burroughs Wellcome Fund, National Institutes of Health/National Cancer Institute (NIH/NCI), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Department of Energy (DOE, United States)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.195 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121

Kirchdoerfer, R.N.Abelson, D.M.Li, S.Wood, M.R.Saphire, E.O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Polymerase cofactor VP35,NucleoproteinA, B381Ebola virus - Mayinga, Zaire, 1976Mutation(s): 0 
Gene Names: VP35NP
UniProt
Find proteins for Q05127 (Zaire ebolavirus (strain Mayinga-76))
Explore Q05127 
Go to UniProtKB:  Q05127
Find proteins for P18272 (Zaire ebolavirus (strain Mayinga-76))
Explore P18272 
Go to UniProtKB:  P18272
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.195 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 94.881α = 90
b = 94.951β = 90
c = 112.106γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
Aimlessdata scaling
PHASERphasing
PDB_EXTRACTdata extraction
XDSdata reduction

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States1R56 AI118016-01
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States5T32 AI007354-25
Burroughs Wellcome FundUnited States--
National Institutes of Health/National Cancer Institute (NIH/NCI)United StatesACB-12002
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesAGM-12006
Department of Energy (DOE, United States)United StatesDE-AC02-06CH11357

Revision History  (Full details and data files)

  • Version 1.0: 2015-05-27
    Type: Initial release
  • Version 1.1: 2017-09-27
    Changes: Author supporting evidence, Derived calculations, Refinement description, Source and taxonomy
  • Version 1.2: 2019-12-04
    Changes: Author supporting evidence