4YL5

Structure of a putative phosphomethylpyrimidine kinase from Acinetobacter baumannii


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.160 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure of a putative phosphomethylpyrimidine kinase from Acinetobacter baumannii.

Abendroth, J.Lukacs, C.M.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative phosphomethylpyrimidine kinase
A
263Acinetobacter baumannii IS-123Mutation(s): 0 
Find proteins for A0A0J9X285 (Acinetobacter baumannii IS-123)
Go to UniProtKB:  A0A0J9X285
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 58.820α = 90.00
b = 108.100β = 90.00
c = 88.880γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
XDSdata scaling
BALBESphasing
PDB_EXTRACTdata extraction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-04-01
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Advisory, Derived calculations, Refinement description, Source and taxonomy