4YL4

1.1 Angstrom resolution X-ray Crystallographic Structure of Psudoazurin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.148 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

X-ray crystallographic evidence for the simultaneous presence of axial and rhombic sites in cupredoxins: atomic resolution X-ray crystal structure analysis of pseudoazurin and DFT modelling

Yamaguchi, T.Akao, K.Takashina, A.Asamura, S.Unno, M.Szilagyi, R.K.Kohzuma, T.

(2016) Rsc Adv 6: 88358-88365


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Pseudoazurin
A
124Achromobacter cycloclastesMutation(s): 0 
Gene Names: bcp
Find proteins for P19567 (Achromobacter cycloclastes)
Go to UniProtKB:  P19567
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
CU
Query on CU

Download SDF File 
Download CCD File 
A
COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.148 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 56.019α = 90.00
b = 63.200β = 90.00
c = 67.045γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-03-09
    Type: Initial release
  • Version 1.1: 2016-12-28
    Type: Database references