4XE7

Bacillus thuringiensis ParM in apo form

PDB DOI: https://doi.org/10.2210/pdb4XE7/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Bacillus thuringiensis serovar kurstaki str. YBT-1520
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2014-12-23 Released: 2016-03-09
Deposition Author(s): Jiang, S.M., Robinson, R.C.
Funding Organization(s): Agency for Science, Technology and Research (A*STAR)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.233
R-Value Work: 0.186
R-Value Observed: 0.189

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

A novel plasmid-segregating actin-like protein from Bacillus thuringiensis forms dynamically unstable tubules

Jiang, S.M., Narita, A., Popp, D., Ghoshdastider, U., Lee, L.J., Srinivasan, R., Balasubramanian, M.K., Oda, T., Koh, F.J., Larsson, M., Robinson, R.C.

To be published.

Macromolecule Content

Total Structure Weight: 47.53 kDa
Atom Count: 3,639
Modelled Residue Count: 419
Deposited Residue Count: 423
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A	423	Bacillus thuringiensis serovar kurstaki str. YBT-1520	Mutation(s): 0 Gene Names: YBT1520_33546
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.233
R-Value Work: 0.186
R-Value Observed: 0.189
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 49.248	α = 90
b = 116.43	β = 115.73
c = 52.171	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHASER	phasing
PDB_EXTRACT	data extraction
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2016-03-09

Deposition Author(s):

Funding Organization	Location	Grant Number
Agency for Science, Technology and Research (A*STAR)	Singapore	12302FG012

Revision History (Full details and data files)

Version 1.0: 2016-03-09
Type: Initial release
Version 1.1: 2024-02-28
Changes: Data collection, Database references, Derived calculations

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.