4X3G

Crystal structure of SIAH1 SINA domain in complex with a USP19 peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.222 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of SIAH1 SINA domain in complex with a USP19 peptide

Walker, J.R.Dong, A.Zhang, Q.Huang, X.Li, Y.Bountra, C.Edwards, A.M.Arrowsmith, C.H.Tong, Y.Structural Genomics Consortium (SGC)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
E3 ubiquitin-protein ligase SIAH1
A, B
193Homo sapiensMutation(s): 0 
Gene Names: SIAH1 (HUMSIAH)
EC: 2.3.2.27
Find proteins for Q8IUQ4 (Homo sapiens)
Go to Gene View: SIAH1
Go to UniProtKB:  Q8IUQ4
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin carboxyl-terminal hydrolase 19
C, D
14Homo sapiensMutation(s): 0 
Gene Names: USP19 (KIAA0891, ZMYND9)
EC: 3.4.19.12
Find proteins for O94966 (Homo sapiens)
Go to Gene View: USP19
Go to UniProtKB:  O94966
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.222 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 41.343α = 90.00
b = 88.092β = 103.24
c = 59.590γ = 90.00
Software Package:
Software NamePurpose
BUSTER-TNTrefinement
PDB_EXTRACTdata extraction
MOLREPphasing
HKL-3000data scaling
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-12-31
    Type: Initial release
  • Version 1.1: 2016-04-27
    Type: Structure summary
  • Version 1.2: 2018-01-24
    Type: Database references, Derived calculations