4X2Q

Crystal Structure of Human Aldehyde Dehydrogenase, ALDH1a2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.313 
  • R-Value Work: 0.266 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Synthesis and In Vitro Testing of Bisdichloroacetyldiamine Analogs for Use as a Reversible Male Contraceptive

Goldstein, A.S.Paik, J.Moreb, J.Haenisch, M.Le Trong, I.Stenkamp, R.E.Petrie, A.G.Smith, N.Mallochowski, W.P.Amory, J.K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Retinal dehydrogenase 2
A, B, C, D
504Homo sapiensMutation(s): 0 
Gene Names: ALDH1A2 (RALDH2)
EC: 1.2.1.36
Find proteins for O94788 (Homo sapiens)
Go to Gene View: ALDH1A2
Go to UniProtKB:  O94788
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAD
Query on NAD

Download SDF File 
Download CCD File 
A, B, C, D
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.313 
  • R-Value Work: 0.266 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 84.597α = 90.00
b = 140.508β = 90.00
c = 164.452γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data scaling
HKL-2000data reduction
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human DevelopmentUnited StatesU01 HD060488
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human DevelopmentUnited StatesU54 HD42454

Revision History 

  • Version 1.0: 2015-12-02
    Type: Initial release
  • Version 1.1: 2017-09-20
    Type: Author supporting evidence, Derived calculations