4WBR

Structure of Bradyrhizobium japonicum ScoI with copper bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.126 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Bradyrhizobium japonicum ScoI with copper bound

Quade, N.Abicht, H.K.Hennecke, H.Glockshuber, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Blr1131 protein
D
157Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)Mutation(s): 0 
Find proteins for Q89VB6 (Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110))
Go to UniProtKB:  Q89VB6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CU
Query on CU

Download SDF File 
Download CCD File 
D
COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.175 
  • R-Value Work: 0.126 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 92.860α = 90.00
b = 44.760β = 90.00
c = 40.000γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
XSCALEdata reduction
PDB_EXTRACTdata extraction
XDSdata reduction
REFMACrefinement
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-09-23
    Type: Initial release