4V6L | pdb_00004v6l

Structural insights into cognate vs. near-cognate discrimination during decoding.

PDB DOI: https://doi.org/10.2210/pdb4V6L/pdb
Entry: 4V6L supersedes: 3IZT, 3IZV
NAKB: 4V6L
EM Map EMD-1850: EMDB EMDataResource

Classification: RIBOSOME
Organism(s): Escherichia coli DH1, Escherichia coli K-12, Escherichia coli, Escherichia coli O157:H7
Mutation(s): No

Deposited: 2011-01-07 Released: 2014-07-09
Deposition Author(s): Agirrezabala, X., Schreiner, E., Trabuco, L.G., Lei, J., Ortiz-Meoz, R.F., Schulten, K., Green, R., Frank, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 13.2 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Starting Models: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 3.4 of the entry. See complete history.

Literature

Structural insights into cognate versus near-cognate discrimination during decoding.

Agirrezabala, X., Schreiner, E., Trabuco, L.G., Lei, J., Ortiz-Meoz, R.F., Schulten, K., Green, R., Frank, J.

(2011) EMBO J 30: 1497-1507

PubMed: 21378755 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1038/emboj.2011.58
Primary Citation Related Structures:
4V6K, 4V6L

PubMed Abstract:
The structural basis of the tRNA selection process is investigated by cryo-electron microscopy of ribosomes programmed with UGA codons and incubated with ternary complex (TC) containing the near-cognate Trp-tRNA(Trp) in the presence of kirromycin. Going through more than 350 000 images and employing image classification procedures, we find ∼8% in which the TC is bound to the ribosome. The reconstructed 3D map provides a means to characterize the arrangement of the near-cognate aa-tRNA with respect to elongation factor Tu (EF-Tu) and the ribosome, as well as the domain movements of the ribosome. One of the interesting findings is that near-cognate tRNA's acceptor stem region is flexible and CCA end becomes disordered. The data bring direct structural insights into the induced-fit mechanism of decoding by the ribosome, as the analysis of the interactions between small and large ribosomal subunit, aa-tRNA and EF-Tu and comparison with the cognate case (UGG codon) offers clues on how the conformational signals conveyed to the GTPase differ in the two cases.

Organizational Affiliation

Structural Biology Unit, CIC-bioGUNE, Derio, Basque Country, Spain.

Macromolecule Content

Total Structure Weight: 2,280.36 kDa
Atom Count: 153,634
Modeled Residue Count: 11,394
Deposited Residue Count: 11,424
Unique protein chains: 52
Unique nucleic acid chains: 5

Macromolecules

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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Elongation factor Tu 2	C [auth AC]	393	Escherichia coli K-12	Mutation(s): 0 EC: 3.6.5.3
UniProt
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UniProt Group	P0CE48
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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S2	F [auth AF]	241	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7V0 (Escherichia coli (strain K12)) Explore P0A7V0 Go to UniProtKB: P0A7V0
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7V0
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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S3	G [auth AG]	233	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7V3 (Escherichia coli (strain K12)) Explore P0A7V3 Go to UniProtKB: P0A7V3
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7V3
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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S4	H [auth AH]	206	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7V8 (Escherichia coli (strain K12)) Explore P0A7V8 Go to UniProtKB: P0A7V8
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7V8
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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S5	I [auth AI]	167	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7W1 (Escherichia coli (strain K12)) Explore P0A7W1 Go to UniProtKB: P0A7W1
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7W1
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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S6	J [auth AJ]	135	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P02358 (Escherichia coli (strain K12)) Explore P02358 Go to UniProtKB: P02358
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UniProt Group	P02358
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Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S7	K [auth AK]	179	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P02359 (Escherichia coli (strain K12)) Explore P02359 Go to UniProtKB: P02359
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UniProt Group	P02359
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Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S8	L [auth AL]	130	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7W7 (Escherichia coli (strain K12)) Explore P0A7W7 Go to UniProtKB: P0A7W7
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7W7
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Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S9	M [auth AM]	130	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7X3 (Escherichia coli (strain K12)) Explore P0A7X3 Go to UniProtKB: P0A7X3
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UniProt Group	P0A7X3
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Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S10	N [auth AN]	103	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7R5 (Escherichia coli (strain K12)) Explore P0A7R5 Go to UniProtKB: P0A7R5
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7R5
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Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S11	O [auth AO]	129	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7R9 (Escherichia coli (strain K12)) Explore P0A7R9 Go to UniProtKB: P0A7R9
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7R9
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Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S12	P [auth AP]	124	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7S3 (Escherichia coli (strain K12)) Explore P0A7S3 Go to UniProtKB: P0A7S3
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7S3
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Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S13	Q [auth AQ]	118	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7S9 (Escherichia coli (strain K12)) Explore P0A7S9 Go to UniProtKB: P0A7S9
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UniProt Group	P0A7S9
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Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S14	R [auth AR]	101	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0AG59 (Escherichia coli (strain K12)) Explore P0AG59 Go to UniProtKB: P0AG59
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UniProt Group	P0AG59
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Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S15	S [auth AS]	89	Escherichia coli O157:H7	Mutation(s): 0
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Find proteins for Q8X9M2 (Escherichia coli O157:H7) Explore Q8X9M2 Go to UniProtKB: Q8X9M2
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UniProt Group	Q8X9M2
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Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S16	T [auth AT]	82	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7T3 (Escherichia coli (strain K12)) Explore P0A7T3 Go to UniProtKB: P0A7T3
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UniProt Group	P0A7T3
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Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S17	U [auth AU]	84	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P0AG63 (Escherichia coli (strain K12)) Explore P0AG63 Go to UniProtKB: P0AG63
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UniProt Group	P0AG63
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Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S18	V [auth AV]	75	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7T7 (Escherichia coli (strain K12)) Explore P0A7T7 Go to UniProtKB: P0A7T7
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UniProt Group	P0A7T7
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Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S19	W [auth AW]	92	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7U3 (Escherichia coli (strain K12)) Explore P0A7U3 Go to UniProtKB: P0A7U3
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UniProt Group	P0A7U3
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Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S20	X [auth AX]	87	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7U7 (Escherichia coli (strain K12)) Explore P0A7U7 Go to UniProtKB: P0A7U7
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UniProt Group	P0A7U7
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Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S21	Y [auth AY]	71	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P68679 (Escherichia coli (strain K12)) Explore P68679 Go to UniProtKB: P68679
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UniProt Group	P68679
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Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L1	BA [auth BC]	234	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7L0 (Escherichia coli (strain K12)) Explore P0A7L0 Go to UniProtKB: P0A7L0
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UniProt Group	P0A7L0
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Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L2	CA [auth BD]	273	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422 Go to UniProtKB: P60422
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UniProt Group	P60422
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Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L3	DA [auth BE]	209	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438 Go to UniProtKB: P60438
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UniProt Group	P60438
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Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L4	EA [auth BF]	201	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P60723 (Escherichia coli (strain K12)) Explore P60723 Go to UniProtKB: P60723
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P60723
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Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L5	FA [auth BG]	179	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P62399 (Escherichia coli (strain K12)) Explore P62399 Go to UniProtKB: P62399
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UniProt Group	P62399
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Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L6	GA [auth BH]	177	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0AG55 (Escherichia coli (strain K12)) Explore P0AG55 Go to UniProtKB: P0AG55
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UniProt Group	P0AG55
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Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L9	HA [auth BI]	149	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7R1 (Escherichia coli (strain K12)) Explore P0A7R1 Go to UniProtKB: P0A7R1
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UniProt Group	P0A7R1
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Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L11	IA [auth BJ]	142	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7J7 (Escherichia coli (strain K12)) Explore P0A7J7 Go to UniProtKB: P0A7J7
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UniProt Group	P0A7J7
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Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L13	JA [auth BK]	142	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0AA10 (Escherichia coli (strain K12)) Explore P0AA10 Go to UniProtKB: P0AA10
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UniProt Group	P0AA10
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Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L14	KA [auth BL]	123	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0ADY3 (Escherichia coli (strain K12)) Explore P0ADY3 Go to UniProtKB: P0ADY3
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UniProt Group	P0ADY3
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Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L15	LA [auth BM]	144	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P02413 (Escherichia coli (strain K12)) Explore P02413 Go to UniProtKB: P02413
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UniProt Group	P02413
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Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L16	MA [auth BN]	136	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0ADY7 (Escherichia coli (strain K12)) Explore P0ADY7 Go to UniProtKB: P0ADY7
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UniProt Group	P0ADY7
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Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L17	NA [auth BO]	127	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0AG44 (Escherichia coli (strain K12)) Explore P0AG44 Go to UniProtKB: P0AG44
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UniProt Group	P0AG44
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Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L18	OA [auth BP]	117	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P0C018 (Escherichia coli (strain K12)) Explore P0C018 Go to UniProtKB: P0C018
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UniProt Group	P0C018
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Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L19	PA [auth BQ]	115	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7K6 (Escherichia coli (strain K12)) Explore P0A7K6 Go to UniProtKB: P0A7K6
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UniProt Group	P0A7K6
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Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L20	QA [auth BR]	118	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7L3 (Escherichia coli (strain K12)) Explore P0A7L3 Go to UniProtKB: P0A7L3
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UniProt Group	P0A7L3
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Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L21	RA [auth BS]	103	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P0AG48 (Escherichia coli (strain K12)) Explore P0AG48 Go to UniProtKB: P0AG48
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UniProt Group	P0AG48
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Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L22	SA [auth BT]	110	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P61175 (Escherichia coli (strain K12)) Explore P61175 Go to UniProtKB: P61175
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UniProt Group	P61175
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Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L23	TA [auth BU]	100	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0ADZ0 (Escherichia coli (strain K12)) Explore P0ADZ0 Go to UniProtKB: P0ADZ0
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UniProt Group	P0ADZ0
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Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L24	UA [auth BV]	104	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P60624 (Escherichia coli (strain K12)) Explore P60624 Go to UniProtKB: P60624
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UniProt Group	P60624
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Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L25	VA [auth BW]	94	Escherichia coli K-12	Mutation(s): 0
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Find proteins for P68919 (Escherichia coli (strain K12)) Explore P68919 Go to UniProtKB: P68919
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UniProt Group	P68919
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Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L27	WA [auth BX]	85	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7L8 (Escherichia coli (strain K12)) Explore P0A7L8 Go to UniProtKB: P0A7L8
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UniProt Group	P0A7L8
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Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L28	XA [auth BY]	78	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7M2 (Escherichia coli (strain K12)) Explore P0A7M2 Go to UniProtKB: P0A7M2
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UniProt Group	P0A7M2
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Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L29	YA [auth BZ]	63	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7M6 (Escherichia coli (strain K12)) Explore P0A7M6 Go to UniProtKB: P0A7M6
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UniProt Group	P0A7M6
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Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L30	ZA [auth Ba]	59	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0AG51 (Escherichia coli (strain K12)) Explore P0AG51 Go to UniProtKB: P0AG51
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UniProt Group	P0AG51
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Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L31	AB [auth Bb]	70	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7M9 (Escherichia coli (strain K12)) Explore P0A7M9 Go to UniProtKB: P0A7M9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7M9
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Reference Sequence

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Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L32	BB [auth Bc]	57	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7N4 (Escherichia coli (strain K12)) Explore P0A7N4 Go to UniProtKB: P0A7N4
Entity Groups
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UniProt Group	P0A7N4
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Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L33	CB [auth Bd]	55	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7N9 (Escherichia coli (strain K12)) Explore P0A7N9 Go to UniProtKB: P0A7N9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7N9
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Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L34	DB [auth Be]	46	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7P5 (Escherichia coli (strain K12)) Explore P0A7P5 Go to UniProtKB: P0A7P5
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UniProt Group	P0A7P5
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Reference Sequence

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Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L35	EB [auth Bf]	65	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7Q1 (Escherichia coli (strain K12)) Explore P0A7Q1 Go to UniProtKB: P0A7Q1
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UniProt Group	P0A7Q1
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Reference Sequence

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Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details	Image
50S ribosomal protein L36	FB [auth Bg]	38	Escherichia coli K-12	Mutation(s): 0
UniProt
Find proteins for P0A7Q6 (Escherichia coli (strain K12)) Explore P0A7Q6 Go to UniProtKB: P0A7Q6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A7Q6
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Molecule	Chains	Length	Organism
Entity ID: 1
16S ribosomal RNA	A [auth AA]	1,542	Escherichia coli DH1
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Molecule	Chains	Length	Organism
Entity ID: 2
A/T-site tRNA Phe	B [auth AB], E [auth AE]	76	Escherichia coli DH1
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Molecule	Chains	Length	Organism
Entity ID: 4
mRNA	D [auth AD]	24	Escherichia coli
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Molecule	Chains	Length	Organism
Entity ID: 25
50S ribosomal RNA 5S	Z [auth BA]	120	Escherichia coli K-12
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Molecule	Chains	Length	Organism
Entity ID: 26
50S ribosomal RNA 23S	AA [auth BB]	2,904	Escherichia coli K-12
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Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 13.2 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
RECONSTRUCTION	SPIDER	2.7

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2014-07-09

Deposition Author(s):

This entry supersedes: 3IZT, 3IZV

Revision History (Full details and data files)

Version 1.0: 2014-07-09
Type: Initial release
Version 1.1: 2014-12-10
Changes: Other
Version 1.2: 2015-03-25
Changes: Other
Version 2.0: 2018-07-18
Changes: Data collection, Polymer sequence
Version 3.0: 2019-07-03
Changes: Data collection, Derived calculations, Non-polymer description, Structure summary
Version 3.1: 2019-12-18
Changes: Other
Version 3.2: 2024-02-28
Changes: Data collection, Database references, Derived calculations, Refinement description, Structure summary
Version 3.3: 2025-02-19
Changes: Data collection, Structure summary
Version 3.4: 2025-03-19
Changes: Data collection

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

4V6L | pdb_00004v6l

Structural insights into cognate vs. near-cognate discrimination during decoding.

Literature

Structural insights into cognate versus near-cognate discrimination during decoding.

Biological Assembly 1

Macromolecules

Entity ID: 3

UniProt

Entity Groups

Sequence Annotations

Entity ID: 5

UniProt

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Entity ID: 6

UniProt

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Entity ID: 7

UniProt

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Entity ID: 9

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Entity ID: 10

UniProt

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Entity ID: 11

UniProt

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Entity ID: 12

UniProt

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Entity ID: 13

UniProt

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Entity ID: 14

UniProt

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Entity ID: 15

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Entity ID: 16

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Entity ID: 17

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Entity ID: 18

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Entity ID: 19

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Entity ID: 20

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Entity ID: 21

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Entity ID: 22

UniProt