4UE0

Structure of the bovine atadenovirus type 4 fibre head protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.17 Å
  • R-Value Free: 0.146 
  • R-Value Work: 0.116 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of the fibre head domain of bovine adenovirus 4, a ruminant atadenovirus.

Nguyen, T.H.Vidovszky, M.Z.Ballmann, M.Z.Sanz-Gaitero, M.Singh, A.K.Harrach, B.Benko, M.van Raaij, M.J.

(2015) Virol. J. 12: 81-81

  • DOI: 10.1186/s12985-015-0309-1

  • PubMed Abstract: 
  • In adenoviruses, primary host cell recognition is generally performed by the head domains of their homo-trimeric fibre proteins. This first interaction is reversible. A secondary, irreversible interaction subsequently takes place via other adenovirus ...

    In adenoviruses, primary host cell recognition is generally performed by the head domains of their homo-trimeric fibre proteins. This first interaction is reversible. A secondary, irreversible interaction subsequently takes place via other adenovirus capsid proteins and leads to a productive infection. Although many fibre head structures are known for human mastadenoviruses, not many animal adenovirus fibre head structures have been determined, especially not from those belonging to adenovirus genera other than Mastadenovirus.


    Organizational Affiliation

    Departamento de Estructura de Macromoleculas, Centro Nacional de Biotecnologia (CNB-CSIC), calle Darwin 3, 28049, Madrid, Spain. th.nguyen@cnb.csic.es.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
FIBER
A, B, C
122Bovine adenovirus 4Mutation(s): 0 
Find proteins for Q997H2 (Bovine adenovirus 4)
Go to UniProtKB:  Q997H2
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SCN
Query on SCN

Download SDF File 
Download CCD File 
C
THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
 Ligand Interaction
CO3
Query on CO3

Download SDF File 
Download CCD File 
B
CARBONATE ION
C O3
BVKZGUZCCUSVTD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.17 Å
  • R-Value Free: 0.146 
  • R-Value Work: 0.116 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 43.330α = 117.11
b = 48.190β = 95.56
c = 52.070γ = 110.17
Software Package:
Software NamePurpose
XDSdata reduction
REFMACrefinement
XSCALEdata scaling
autoSHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-06-03
    Type: Initial release
  • Version 1.1: 2018-02-07
    Type: Database references