4U6A

X-ray crystal structure of human TNKS in complex with a small molecule inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.191 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Design and discovery of 3-aryl-5-substituted-isoquinolin-1- ones as potent and selective tankyrase inhibitors

Elliot, R.J.Jarvis, A.Rajasekaran, M.B.Menon, M.Bowers, L.Boffey, R.Bayford, M.Firth-Clark, S.Beevers, R.Aquil, R.Kirton, S.B.Niculescu-Duvaz, D.Fish, L.Lopes, F.McLeary, R.Trindade, I.Vendrell, E.Munkonge, F.Porter, R.Perrior, T.Springer, C.Oliver, A.W.Pearl, L.H.Ashworth, A.Lord, C.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tankyrase-1
A
258Homo sapiensMutation(s): 0 
Gene Names: TNKS (PARP5A, PARPL, TIN1, TINF1, TNKS1)
EC: 2.4.2.30
Find proteins for O95271 (Homo sapiens)
Go to Gene View: TNKS
Go to UniProtKB:  O95271
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
3DN
Query on 3DN

Download SDF File 
Download CCD File 
A
3-(4-{[4-(dimethylamino)piperidin-1-yl]methyl}phenyl)-5-methylisoquinolin-1(2H)-one
C24 H29 N3 O
ZAVBKFISCRSHAT-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.37 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.191 
  • Space Group: I 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 81.380α = 90.00
b = 80.980β = 90.00
c = 84.020γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XSCALEdata reduction
XDSdata reduction
BUSTERrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2014-07-28 
  • Released Date: 2015-07-08 
  • Deposition Author(s): Oliver, A.W.

Funding OrganizationLocationGrant Number
Wellcome TrustUnited KingdomSDDI

Revision History 

  • Version 1.0: 2015-07-08
    Type: Initial release
  • Version 1.1: 2015-07-15
    Type: Other