4U39

Crystal Structure of FtsZ:MciZ Complex from Bacillus subtilis

PDB DOI: https://doi.org/10.2210/pdb4U39/pdb

Classification: CELL CYCLE
Organism(s): Bacillus subtilis
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2014-07-19 Released: 2015-03-18
Deposition Author(s): Bisson-Filho, A.W., Discola, K.F., Castellen, P., Blasios, V., Martins, A., Sforca, M.L., Garcia, W., Zeri, A.C., Erickson, H.P., Dessen, A., Gueiros-Filho, F.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.19 Å
R-Value Free: 0.292
R-Value Work: 0.232
R-Value Observed: 0.235

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal Structure of FtsZ:MciZ Complex from Bacillus subtilis

Bisson-Filho, A.W., Discola, K.F., Castellen, P., Blasios, V., Martins, A., Sforca, M.L., Garcia, W., Zeri, A.C., Erickson, H.P., Dessen, A., Gueiros-Filho, F.J.

To be published.

Macromolecule Content

Total Structure Weight: 347.43 kDa
Atom Count: 19,225
Modelled Residue Count: 2,766
Deposited Residue Count: 3,285
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division protein FtsZ	A, B, C, D, E A, B, C, D, E, F, G, H, I	305	Bacillus subtilis	Mutation(s): 0 Gene Names: ftsZ, BSU15290
UniProt
Find proteins for P17865 (Bacillus subtilis (strain 168)) Explore P17865 Go to UniProtKB: P17865
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P17865
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell division factor	J, K, L, M, N J, K, L, M, N, O, P, Q, R	60	Bacillus subtilis	Mutation(s): 0 Gene Names: mciZ, BSU23616
UniProt
Find proteins for L8EBJ9 (Bacillus subtilis (strain 168)) Explore L8EBJ9 Go to UniProtKB: L8EBJ9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	L8EBJ9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PO4 Query on PO4 Download Ideal Coordinates CCD File SDF format, chain AA [auth E] SDF format, chain BA [auth F] SDF format, chain CA [auth G] SDF format, chain DA [auth G] SDF format, chain EA [auth H] SDF format, chain FA [auth H] SDF format, chain GA [auth I] SDF format, chain HA [auth I] SDF format, chain S [auth A] SDF format, chain T [auth A] SDF format, chain U [auth B] SDF format, chain V [auth B] SDF format, chain W [auth C] SDF format, chain X [auth C] SDF format, chain Y [auth D] SDF format, chain Z [auth D] MOL2 format, chain AA [auth E] MOL2 format, chain BA [auth F] MOL2 format, chain CA [auth G] MOL2 format, chain DA [auth G] MOL2 format, chain EA [auth H] MOL2 format, chain FA [auth H] MOL2 format, chain GA [auth I] MOL2 format, chain HA [auth I] MOL2 format, chain S [auth A] MOL2 format, chain T [auth A] MOL2 format, chain U [auth B] MOL2 format, chain V [auth B] MOL2 format, chain W [auth C] MOL2 format, chain X [auth C] MOL2 format, chain Y [auth D] MOL2 format, chain Z [auth D] mmCIF format, chain AA [auth E] mmCIF format, chain BA [auth F] mmCIF format, chain CA [auth G] mmCIF format, chain DA [auth G] mmCIF format, chain EA [auth H] mmCIF format, chain FA [auth H] mmCIF format, chain GA [auth I] mmCIF format, chain HA [auth I] mmCIF format, chain S [auth A] mmCIF format, chain T [auth A] mmCIF format, chain U [auth B] mmCIF format, chain V [auth B] mmCIF format, chain W [auth C] mmCIF format, chain X [auth C] mmCIF format, chain Y [auth D] mmCIF format, chain Z [auth D]	AA [auth E] BA [auth F] CA [auth G] DA [auth G] EA [auth H] AA [auth E], BA [auth F], CA [auth G], DA [auth G], EA [auth H], FA [auth H], GA [auth I], HA [auth I], S [auth A], T [auth A], U [auth B], V [auth B], W [auth C], X [auth C], Y [auth D], Z [auth D]	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Interactions Focus chain AA [auth E] Focus chain BA [auth F] Focus chain CA [auth G] Focus chain DA [auth G] Focus chain EA [auth H] Focus chain FA [auth H] Focus chain GA [auth I] Focus chain HA [auth I] Focus chain S [auth A] Focus chain T [auth A] Focus chain U [auth B] Focus chain V [auth B] Focus chain W [auth C] Focus chain X [auth C] Focus chain Y [auth D] Focus chain Z [auth D] Interactions & Density Focus chain AA [auth E] Focus chain BA [auth F] Focus chain CA [auth G] Focus chain DA [auth G] Focus chain EA [auth H] Focus chain FA [auth H] Focus chain GA [auth I] Focus chain HA [auth I] Focus chain S [auth A] Focus chain T [auth A] Focus chain U [auth B] Focus chain V [auth B] Focus chain W [auth C] Focus chain X [auth C] Focus chain Y [auth D] Focus chain Z [auth D]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.19 Å
R-Value Free: 0.292
R-Value Work: 0.232
R-Value Observed: 0.235
Space Group: P 6₅ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 167.36	α = 90
b = 167.36	β = 90
c = 528.64	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2015-03-18

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2015-03-18
Type: Initial release
Version 1.1: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy